Structure search for conserved QSs

Parameters selected: TM-score > 0.65; Seq.identity with query < 80%; Seq.overlap with query > 60%

Inference: The query structure (2-mer) is likely to be incomplete. The PISA-generated QS (4-mer) shows evolutionary conservation with 4zrm_1 and is likely to be correct.

For query 1i24_1.pdb (2-mer) we found 17 targets matching the structure.

For PISA-generated 1i24_1 (4-mer) we found 18 targets matching the structure.

Target	% seq.ident.	#subunits	Symmetry	QS confidence	Prediction
Sequence search for similar or identical proteins
Query 1i24_1.pdb (2-mer) - Table for chain A
1i24_2	100.00	4	D2	high confidence	Your query has a very similar sequence to this target. It is likely to adopt the same QS
6vo6_1	44.44	4	D2	unknown	We are uncertain about the physiological relevance of this target's QS. We cannot make a prediction based on it.
1rkx_1	38.09	4	D2	low confidence	We are uncertain about the physiological relevance of this target's QS. We cannot make a prediction based on it.
4lis_1	29.46	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
1kvs_1	28.22	1	NPS	unknown	We are uncertain about the physiological relevance of this target's QS. We cannot make a prediction based on it.
1lrk_1	27.61	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
1kew_1	26.89	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
2b69_1	24.43	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
1gy8_2	24.38	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
4lk3_1	24.08	6	D3	low confidence	We are uncertain about the physiological relevance of this target's QS. We cannot make a prediction based on it.
5u4q_1	23.76	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
3ko8_1	23.63	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
6otv_2	23.60	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
1oc2_1	23.03	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
4id9_1	22.83	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
1orr_1	22.36	4	D2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS
2pk3_1	22.15	2	C2	high confidence	Your query's sequence is fairly distant to this target. It has a 40-60% probability to have the same QS

Structure search for conserved QSs

Sequence search for similar or identical proteins